Jiří Novák, M.Sc.

Jiří Novák, M.Sc.	novak<at>ksi.mff.cuni.cz
Ph.D. student, supervisor Tomáš Skopal, Assoc. Prof.

Research groups

Code	Title	Links
NPRG046	Software Praxis

Title	Student	Type	Started	Defended
Searching relevant articles in extensive collections	Ján Vojt	BS	2010	2012

Similarity Searching in Very Large Multimedia Databases (GACR 201/09/0683) 2009-2011 cooperant
Modern methods and applications of software engineering (GAUK SVV-2010-261312) 2010-2010 cooperant

Lokoč J., Přemysl Č., Novák J., Skopal T.: Cut-region: A Compact Building Block For Hierarchical Metric Indexing, in Lecture Notes in Computer Science, Vol. 2012, Num. 7404, ISSN: 0302-9743, pp. 85-100, 2012
Novák J., Galgonek J., Hoksza D., Skopal T.: SimTandem: Similarity Search in Tandem Mass Spectra, in Lecture Notes in Computer Science, Vol. 2012, Num. 7404, ISSN: 0302-9743, pp. 242-243, 2012
Novák J., Hoksza D., Lokoč J., Skopal T.: On Optimizing the Non-metric Similarity Search in Tandem Mass Spectra by Clustering, in Lecture Notes in Computer Science, Vol. 2012, Num. 7292, ISSN: 0302-9743, pp. 189-200, 2012
Novák J., Skopal T., Hoksza D., Lokoč J.: Non-metric Similarity Search of Tandem Mass Spectra Including Posttranslational Modifications, in Journal of Discrete Algorithms, Vol. 2012, Num. 13, ISSN: 1570-8667, pp. 19-31, 2012 - On-line verze

Novák J., Skopal T., Hoksza D., Lokoč J., Galgonek J.: Protein Sequences Identification using NM-tree, in Fourth International Conference on Similarity Search and Applications 2011, Lipari, Italy, ACM, ISBN: 978-1-4503-0795-6, pp. 125-126, 2011 - On-line verze

Novák J., Hoksza D.: Parametrised Hausdorff Distance as a Non-Metric Similarity Model for Tandem Mass Spectrometry, accepted for publication in Proceedings of the Dateso 2010 Annual International Workshop on DAtabases, TExts, Specifications and Objects, Stedronin-Plazy, Czech Republic, MATFYZPRESS, ISSN: 1613-0073, pp. 1-12, 2010 - On-line PDF verze
Novák J., Hoksza D.: Similarity Search and Posttranslational Modifications in Tandem Mass Spectra, in Bioinformatics and Biomedicine Workshops, Hong Kong, China, IEEE, ISBN: 978-1-4244-8302-0, pp. 845-846, 2010
Novák J., Skopal T., Hoksza D., Lokoč J.: Improving the Similarity Search of Tandem Mass Spectra using Metric Access Methods, in Third International Conference on Similarity Search and Applications, Istanbul, Turkey, ACM, ISBN: 978-1-4503-0420-7, pp. 85-92, 2010 - On-line PDF verze

Novák J., Hoksza D.: An Application of the Metric Access Methods to the Mass Spectrometry Data, in 2009 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, Nashville, Tennessee, USA, IEEE, ISBN: 978-1-4244-2756-7 , pp. 1-8, March 2009